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  • Which CPT Codes are Used in Primary Care Billing

Which CPT Codes are Used in Primary Care Billing

November 6, 2025 / Alex J. Lau / Articles, CPT Codes, Medical Billing, Primary Care Billing, Revenue Cycle Management
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Primary Care Medical Billing, Credentialing

Table of Contents

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  • Why are CPT Codes Critical to Primary Care Billing Accuracy?
  • What Are the E&M Codes Used for Primary Care Office Visits?
    • New Patient Visits (99202-99205)
    • Established Patient Visits (99211-99215)
    • 2026 Medicare Reimbursement Rates for Common E&M Codes
  • Which CPT Codes Cover Annual Physicals and Preventive Visits?
    • Annual Physical Exams (99381-99397)
    • Medicare Annual Wellness Visits (G0438 and G0439)
    • Common Screening and Counseling Codes
  • Diagnostic Testing in the Primary Care Setting
    • Common In-Office Tests
    • Diagnostic Imaging and Procedures
  • What CPT Codes Are Used for Chronic Care Management (CCM)?
    • Chronic Care Management (CCM) Codes
    • Transitional Care Management (TCM) (99495 and 99496)
    • Advance Care Planning (99497 and 99498)
  • Procedures Commonly Performed in Primary Care
    • Skin Procedures
    • Injections and Administrations
  • Immunization Codes: A Two-Part Process
    • Administration Codes
    • Vaccine Product Codes (90xxx)
  •  How Do You Bill Telehealth Visits and Remote Patient Monitoring?
    • Remote Patient Monitoring (RPM)
  • Special Situations and Modifiers
    • Key Modifiers for Primary Care
  • Documentation: Your Billing Safety Net
  • What Are the Most Common Primary Care Billing Mistakes to Avoid?
  • Staying Current with Coding Changes
  • Why Accurate Primary Care Coding Matters
  • Getting Help with Your Primary Care Billing

Primary care billing hinges on selecting the right CPT code and in a practice that may see 25 or more patients daily, small coding errors multiply into significant revenue loss and compliance risk. This guide covers every major CPT code category used in primary care billing: Evaluation & Management (E&M) visits, preventive exams, chronic care management, procedures, immunizations, telehealth, and remote patient monitoring. Whether you are coding your own claims or reviewing your billing team’s work, this is the reference you need for accurate, defensible documentation in 2026.

Why are CPT Codes Critical to Primary Care Billing Accuracy?

Medica Coder, Medical BillerCPT codes are five-digit numbers created by the American Medical Association (AMA) that describe the medical services you provide. Think of them as a universal language that tells insurance companies exactly what you did during a patient visit. In primary care, where you might see 20 different patients with 20 different concerns in a single day, using the right codes keeps your revenue flowing and your documentation solid.

Primary care is unique because you’re often the first stop for patients. You diagnose new problems, manage ongoing conditions like diabetes and hypertension, provide preventive care, and coordinate referrals to specialists. Each of these services has specific codes attached, and knowing which ones to use makes a real difference in your practice’s bottom line.

What Are the E&M Codes Used for Primary Care Office Visits?

Most of what happens in primary care centers around office visits. These Evaluation and Management (E&M) codes are your bread and butter, representing the time and medical decision-making you put into each patient encounter.

New Patient Visits (99202-99205)

When someone walks through your door for the first time, you’ll use new patient codes. These visits typically take longer because you’re establishing a relationship, gathering a complete medical history, and creating a treatment plan from scratch.

The codes range from 99202 (straightforward visit) to 99205 (high-level visit with significant medical decision-making). A healthy 25-year-old coming in for a physical will likely fall into the 99202 or 99203 range. But if you’re seeing a 65-year-old with multiple chronic conditions who’s never been to your practice before, you’re probably looking at a 99204 or 99205.

Established Patient Visits (99211-99215)

Medical Doctor in Need of BillingThese codes cover follow-up visits with patients you’ve already seen. The 99211 is sometimes called a “nurse visit” because it’s minimal, think quick blood pressure checks or vaccine administration where the doctor might not even see the patient. Most primary care visits fall into the 99213 or 99214 range.

A 99213 works well for straightforward follow-ups: checking in on someone’s controlled diabetes, refilling medications for stable conditions, or treating a simple upper respiratory infection. Move up to 99214 when things get more involved, adjusting multiple medications, addressing new symptoms on top of existing conditions, or dealing with an acute problem that requires careful decision-making.

The 99215 is reserved for your most involved visits. These are patients with multiple serious conditions, significant new problems, or situations requiring extensive review of records and coordination of care.

2026 Medicare Reimbursement Rates for Common E&M Codes

The rates below reflect 2026 CMS national Medicare fee schedule amounts. Private payer rates are typically higher and vary by contract.

CPT Code Visit Type Avg. Medicare Rate (2026)
99202 New patient, straightforward ~$75
99203 New patient, low complexity ~$112
99204 New patient, moderate complexity ~$167
99205 New patient, high complexity ~$211
99212 Established, minimal complexity ~$57
99213 Established, low complexity ~$115
99214 Established, moderate complexity ~$170
99215 Established, high complexity ~$218

Rates are approximate national averages. Verify annually via the CMS Physician Fee Schedule Look-Up Tool at cms.gov.

Which CPT Codes Cover Annual Physicals and Preventive Visits?

Primary care is about preventing illnesses, just as much as it’s about treating them. Preventive visit codes are separate from regular office visits and have different billing rules.

Annual Physical Exams (99381-99397)

These codes split into two categories, new patients (99381-99387) and established patients (99391-99397). Within each category, the codes vary by age group. For example, 99391 covers an annual physical for an established patient aged 18-39, while 99397 is for patients 65 and older.

Preventive visits focus on health maintenance: reviewing health history, performing age-appropriate screenings, discussing lifestyle factors, and updating immunizations. Insurance companies have been known to cover these visits at 100% under the Affordable Care Act, but there’s a catch. If you start diagnosing and treating problems during a preventive visit, you may need to add a separate E&M code with a modifier 25.

Medicare Annual Wellness Visits (G0438 and G0439)

For Medicare patients, the Annual Wellness Visit is billed separately from the standard preventive exam series. Medicare covers AWVs at 100% with no patient cost-sharing.

  • G0438: Initial Annual Wellness Visit. Billed once per patient lifetime. Includes a Health Risk Assessment, medication review, vital signs, cognitive screening, depression screening, and a personalized prevention plan.
  • G0439: Subsequent Annual Wellness Visit. Billed every year after the initial AWV. Updates the prevention plan and reviews the prior year’s health changes.

Key billing rules: G0438 can only be billed once per patient lifetime. The patient must have had Medicare Part B for at least 12 months. If you address a separate problem during the same visit, bill an E&M code with Modifier 25 and document the problem visit separately from the wellness visit components.

2026 approximate Medicare rate: G0438 ~$175  |  G0439 ~$130

Common Screening and Counseling Codes

  • 99401-99404: Risk factor reduction counseling (individual)
  • 96160-96161: Health risk assessment
  • G0442-G0443: Annual alcohol screening and counseling
  • G0444: Depression screening

These codes let you bill separately for important preventive services that might happen during a regular visit.

Diagnostic Testing in the Primary Care Setting

Primary care providers order and sometimes perform various diagnostic tests. Knowing the right codes ensures you get paid for this work.

Common In-Office Tests

If your practice performs tests on-site, these codes come into play regularly:

  • 81002: Urinalysis (non-automated, without microscopy)
  • 81003: Urinalysis (automated, without microscopy)
  • 82947-82950: Glucose testing (various methods)
  • 85018: Hemoglobin test
  • 85025: Complete blood count (CBC) with automated differential
  • 36415: Routine venipuncture

Many primary care offices have point-of-care testing equipment that allows for rapid strep tests, flu tests, and basic lab work. Each test has its own code, and you’ll also code for the specimen collection (like venipuncture) separately.

Diagnostic Imaging and Procedures

  • 93000: Electrocardiogram (EKG) with interpretation
  • 93005: Tracing only (when you perform the test but don’t interpret it)
  • 94760: Pulse oximetry
  • 71045-71048: Chest X-ray (if performed in your office)
  • 69210: Ear wax removal

What CPT Codes Are Used for Chronic Care Management (CCM)?

Primary care providers spend significant time managing chronic diseases like diabetes, hypertension, COPD, and heart disease. Beyond regular office visits, there are specific codes that recognize this ongoing work.

Chronic Care Management (CCM) Codes

If you spend at least 20 minutes per month coordinating care for patients with two or more chronic conditions, you can bill for chronic care management:

  • 99490: First 20 minutes of clinical staff time
  • 99439: Each additional 20 minutes
  • 99491: Complex CCM (first hour by physician or clinical staff)

These codes require documented patient consent and specific tracking of time spent on care coordination activities like medication management, care plan updates, and communication with other providers.

Transitional Care Management (TCM) (99495 and 99496)

When patients leave the hospital or skilled nursing facility, Transitional Care Management codes reimburse the extra coordination work involved in the 30 days after discharge. Phone calls, medication reconciliation, reviewing hospital records, and a required face-to-face visit. The key difference between the two codes is complexity and timing.

99495 99496
Medical decision-making Moderate complexity High complexity
Required face-to-face visit Within 14 calendar days of discharge Within 7 calendar days of discharge
Required contact (call or message) Within 2 business days of discharge Within 2 business days of discharge
2026 approx. Medicare rate ~$175 ~$237

Common error #1: Many practices default to 99495 without realizing their documentation supports 99496, leaving $60 or more per patient on the table. If the discharge diagnosis was high complexity (heart failure, sepsis, COPD exacerbation) and you saw the patient within 7 days, bill 99496.

Common error #2: Failing to document the initial contact within 2 business days. Without a dated, timed entry in the chart, the entire TCM claim is at audit risk. Set an EHR workflow trigger on the day of discharge notification.

TCM codes cannot be billed alongside CCM codes during the same 30-day period for the same patient.

Advance Care Planning (99497 and 99498)

Advance Care Planning codes cover face-to-face conversations with patients, and when appropriate, their family members or surrogates, about future medical care wishes, end-of-life decisions, resuscitation preferences, and completion of advance directives or POLST forms.

  • 99497: First 30 minutes of advance care planning by the physician or qualified healthcare professional.
  • 99498: Each additional 30 minutes (add-on code, billed with 99497).

Medicare covers ACP with no patient cost-sharing when billed with Modifier 33. ACP can be billed on the same day as an E&M visit and applies at any stage of a patient’s care — not only for patients with terminal illness.

Documentation required: Notes must confirm the discussion was voluntary, identify who participated, and summarize the content (directives discussed, documents completed or reviewed). Time must be documented.

2026 approximate Medicare rate: 99497 ~$86  |  99498 ~$75 (add-on)

Procedures Commonly Performed in Primary Care

Primary care providers handle various minor procedures that deserve separate billing beyond the office visit code.

Skin Procedures

  • 11055-11057: Paring or cutting of corns and calluses
  • 11200-11201: Removal of skin tags
  • 11400-11446: Excision of benign skin lesions (codes vary by size and location)
  • 11720-11721: Nail debridement or trimming
  • 17000-17004: Destruction of benign or premalignant lesions

Injections and Administrations

  • 96372: Subcutaneous or intramuscular injection (like vitamin B12, antibiotics)
  • 96401: Chemotherapy injection (subcutaneous or intramuscular)
  • 20610: Arthrocentesis (joint aspiration), major joint
  • J-codes: Used alongside administration codes to identify the specific drug given

When you give an injection, you typically bill both the administration code (like 96372) and the drug code (a J-code) that identifies what medication you administered.

Immunization Codes: A Two-Part Process

Vaccines require two codes. One for the vaccine product itself and one for administering it.

Administration Codes

  • 90460-90461: Immunization administration with counseling (first vaccine and each additional)
  • 90471-90472: Immunization administration without counseling (first vaccine and each additional)
  • 90473-90474: Intranasal or oral vaccine administration

Vaccine Product Codes (90xxx)

These codes specify which vaccine you gave.

For example:

  • 90707: MMR vaccine
  • 90686: Influenza vaccine
  • 90715: Tdap vaccine

Your billing team needs to code both the product and the administration to get full reimbursement.

 How Do You Bill Telehealth Visits and Remote Patient Monitoring?

The growth of telehealth has opened new billing opportunities for primary care practices. Most office visit codes (99202-99215) can be used for telehealth visits when you add modifier 95 to show the service was provided remotely.

Remote Patient Monitoring (RPM)

For patients with chronic conditions, remote monitoring codes let you bill for tracking their health data outside office visits:

  • 99453: Initial setup and patient education (one-time code)
  • 99454: Device supply with daily recording (per 30-day period)
  • 99457: First 20 minutes of monitoring and treatment management
  • 99458: Each additional 20 minutes

These codes work well for monitoring blood pressure, glucose levels, weight, or other vital signs between visits.

Special Situations and Modifiers

Sometimes you need to add modifiers to your codes to give insurance companies more information about the service you provided.

Key Modifiers for Primary Care

  • Modifier 25 is probably the most important one you’ll use. It tells the payer that you provided a significant, separately identifiable E&M service on the same day as another procedure. For example, if a patient comes in for a physical (preventive visit) but you also need to address their uncontrolled blood pressure (problem visit), you’d bill the preventive code and add an office visit code with modifier 25.
  • Modifier 95 indicates a synchronous telehealth service, you and the patient connected in real-time via video.
  • Modifier 59 shows that a procedure was distinct or separate from other services performed on the same day.

For a full reference of modifiers used in primary care, the table below covers each one with its correct use case and the most common billing error:

Modifier Name When to Use Common Error
25 Significant, Separately Identifiable E&M Same-day E&M + procedure (e.g., preventive visit + problem visit) Forgetting to attach it, the E&M gets bundled into the procedure and denied
95 Synchronous Telemedicine Real-time video visit using standard E&M codes Using it for audio-only visits, audio-only requires Modifier 93
59 Distinct Procedural Service Two procedures on the same day that would otherwise be bundled Overusing it as a blanket denial fix, it requires true clinical distinction
33 Preventive Service ACA-covered preventive service with no patient cost-sharing Forgetting it on AWV or ACP, patient gets incorrectly billed
GT Via Interactive Audio/Video Legacy Medicare telehealth (confirm payer policy) Using alongside Modifier 95, most payers require one or the other, not both
GQ Via Asynchronous Telecommunications Store-and-forward telehealth (specific waiver programs only) Billing GQ for live video visits
52 Reduced Services Service partially reduced at physician’s discretion Confusing with Modifier 53 (discontinued procedure), different clinical situations
57 Decision for Surgery E&M on same day a major surgery decision is made Forgetting it when deciding to perform a 90-day global procedure same day

Documentation: Your Billing Safety Net

Half White, Half Asian Female Medical Billing ExpertGood documentation protects you during audits and supports the codes you submit. Your notes should clearly show what you did and why you did it.

For E&M codes, document the patient’s chief complaint, relevant history, your examination findings, your assessment (diagnosis), and your plan. The 2021 E&M guidelines let you choose codes based on either time or medical decision-making, which gives you flexibility, but your documentation needs to support whichever method you use.

Medical decision-making considers three factors: the number and type of problems addressed, the amount and complexity of data you reviewed or ordered, and the risk involved in treatment. Straightforward problems with minimal data review and low risk point toward lower-level codes. Multiple chronic conditions, extensive record review, and higher-risk treatments justify higher-level codes.

What Are the Most Common Primary Care Billing Mistakes to Avoid?

Certain coding errors keep popping up in primary care.

Here’s what to watch out for:

  • Choosing codes based only on time
    While time can determine E&M level, it’s not the only factor. If you spend 30 minutes with a patient but the medical decision-making is straightforward, you can’t automatically bill a high-level code.
  • Forgetting modifier 25
    When you do a procedure and an E&M service on the same day, that modifier 25 on the E&M code is crucial. Without it, the office visit gets bundled into the procedure and you lose that reimbursement.
  • Inconsistent documentation
    If your note says you examined multiple body systems but you only documented two, auditors will downcode your claim. Write what you did.
  • Not coding everything you do
    Did you spend time reviewing outside records? Coordinating with a specialist? These activities count and should be documented and coded when appropriate.
  • Using outdated codes
    CPT codes change annually. Make sure your billing software and your team stay current.

Staying Current with Coding Changes

Hispanic Female Doctor Treating ToddlerThe CPT code book gets updated every January, and payers often release new policies throughout the year. Primary care practices need systems to stay informed about these changes.

Subscribe to updates from the AMA, CMS, and your major payers. Many state primary care associations offer coding resources and training. Consider having someone on your team become certified in medical coding, their expertise pays for itself through improved accuracy and fewer claim denials.

Why Accurate Primary Care Coding Matters

Getting your coding right isn’t just about maximizing revenue, though that’s certainly important. Accurate codes create a clear picture of what’s happening with your patient population. These codes feed into quality metrics, public health tracking, and research that improves healthcare for everyone.

When you correctly code for chronic care management, preventive services, and care coordination, you’re not only getting paid fairly, you’re demonstrating the value that primary care brings to the healthcare system. This data helps argue for better reimbursement rates and recognition of primary care’s central role in keeping patients healthy.

Primary care providers juggle an incredible range of responsibilities. From newborn checkups to geriatric care, from mental health screening to wound care, your day is never predictable. Having a solid grasp of CPT codes, or a billing team that does, lets you focus on patient care while ensuring your practice stays financially healthy.

Getting Help with Your Primary Care Billing

Medwave Medical Billing, Credentialing, Contracting Company Logo CollageIf coding and billing feel overwhelming on top of everything else you’re managing, you’re not alone. Many primary care practices partner with specialized billing companies to handle these details. At Medwave, we focus specifically on medical billing, credentialing, and payer contracting for healthcare providers. We understand the particular challenges primary care faces and work to maximize your reimbursement while keeping your documentation compliant.

Whether you’re looking to outsource your entire primary care billing operation or just need help with specific coding questions, having expert support can make a significant difference in your practice’s financial health.


*Billing note: CPT code descriptions, reimbursement rates, and payer policies are updated annually. This guide reflects AMA CPT guidelines and CMS fee schedule data current as of January 2026. Always verify codes against your payer contracts and the current CPT codebook before submitting claims.

Alex J. Lau
Alex J. Lau

Co-Founder and COO of Medwave, bringing more than 30 years of hands-on experience in healthcare revenue cycle management, payer contracting, and medical credentialing.

Chronic Care Management, CPT codes, E&M Codes, Evaluation and Management, Medical Coding, Preventive Care Billing, Primary Care Billing, Remote Patient Monitoring, Telehealth Billing

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